Prostate Cancer DNA Test Uses Small Blood Sample, Predicts Response to Drug

Date Posted: 

From VCH Research News, May 4, 2016

New tools developed at the Vancouver Prostate Centre (VPC) are substantially advancing the possibility of offering precise, personalized therapies to effectively treat treatment-resistant prostate cancer, also known as metastatic castration-resistant prostate cancer (mCRPC).

Detailed in a recently published paper in JAMA Oncology, VPC researchers have discovered a method for testing prostate cancer DNA from a small blood sample, making it possible to retrieve exact information about how the cancer is genetically changing and helping determine the type of treatment best suited to treat it at that moment.

“There exists an urgent need to be able to monitor a patient’s cancer in real time and to select the most appropriate treatment option based on the cancer’s genetic make-up,” explains Dr. Kim Chi, study senior author and associate director of clinical research at the VPC, which is a national Centre of Excellence for Commercialization and Research hosted by Vancouver Coastal Health Research Insti tute and the University of British Columbia.

The past five years have seen an explosion in the number of novel therapies for mCRPC. Enzalutamide, one of the drugs that emerged in that time, is part of a class of agents known as androgen receptor inhibitors that have powerful effects on prostate tumours and significantly prolong life expectancy in men with mCRPC. However, patients inevitably become resistant to the drug. How and why this happens is not yet well understood.

In response to this phenomenon, the study’s first author Dr. Alexander Wyatt, Dr. Chi, and their VPC colleagues sought to find a way to develop biomarkers to be able to identify which drugs should be used in a given patient at a given time and to find what exactly is fuelling therapy resistance.

Previous research has shown that prostate cancers shed a small amount of DNA into the bloodstream and that some DNA changes that are present in a patient’s cancer are therefore detectable in a blood sample. Building on this, the VPC team developed a technique to isolate the cell-free DNA from the blood sample, and also developed a custom sequencing test that only gave DNA sequence information for the genes they sought to investigate.

The researchers’ methods and techniques demonstrated that clinically-informative genomic profiling allowed for the ability to predict a patient’s response to hormone therapy and was feasible in nearly all mCRPC patients.

Dr. Wyatt credits both the advancement of next-generation sequencing technology and a “revolution” in liquid biopsy for the ability to test tumour DNA via blood sample.

“If you want to develop biomarkers or therapy resistance, you need to look at something from the tumour, but one of the barriers with mCRPC has always been the inability to readily sample tumour tissue in these patients,” says Dr. Wyatt, senior research scientist at the VPC and assistant professor in the Department of Urologic Sciences at UBC.

“In these patients, 90 per cent of metastases are in the bone, meaning that if you want to get a tissue sample you have to put a big needle into the bone, which is pretty grim, especially for patients who are already very sick.”

Dr. Wyatt and Dr. Chi are excited to build upon their research through a phase II ‘umbrella’ trial launching later this year. 

“We’re excited to be spearheading Canada’s first precision medicine trial for prostate cancer and the first real implementation of circulating tumour DNA as a prospective biomarker,” says Dr. Wyatt.

The trial will involve mCRPC patients for whom almost all therapies have failed and will analyze their cell-free DNA blood samples to look for specific aberrations or mutations that may suggest sensitivity to other drugs not currently available to prostate cancer patients.

“The overall goal is to help to improve the way that patients with advanced prostate cancer are treated,” shares Dr. Chi, who is also a medical oncologist at the BC Cancer Agency.

“We want to improve their quality and duration of life,” adds Dr. Wyatt. “Most excitingly, we want to broaden their choice of available drugs to treat their disease and give them options that would not have been available to them before.”

Click here to view this article on VCHRI's website, where it was originally published

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