Dr. Martin Ester

Dr. Martin Ester

M.Sc. Computer Science, University of Dortmund, Germany
P.hD. Computer Science, Swiss Federal Institute of Technology (ETH)

Team: 
Clinical and Research Scientists
Positions: 

Director, School of Computing Science, Simon Fraser University
Senior Research Scientist, Vancouver Prostate Centre

 

Dr. Martin Ester is Co-Director of SFU’s Data Mining Research Lab  in the School of Computing Science. He has more than 20 years of research experience in the areas of data mining and machine learning and is regarded as an international leader in his field. The highly-regarded Digital Library Aminer ranked Dr. Ester as the Top Most Influential Scholar in 2016 in the area of data mining.

As one of the foci of his research, Dr. Ester has explored the potential of data mining to support Precision Medicine. His lab has in particular worked on cancer marker discovery, patient stratification, and drug-target interaction prediction, all in collaboration with Drs. Collins and Cherkasov. In terms of computational methods, he has mainly used probabilistic graphical models, and more recently Deep Neural Networks.

Dr. Ester is not only interested in basic research, but also in the translation of research results into industrial or clinical applications. A successful way of knowledge translation is the development of open source tools. For instance, PSORTb, developed together with Dr. Fiona Brinkman’s lab at SFU several years ago, is still widely used as state-of-the-art tool for protein subcellular localization prediction in bacteria.

Another effective way of knowledge translation is the interdisciplinary training of graduate students, who have co-senior supervisors from the life sciences and are embedded in both the Data Mining Lab and a life science lab. Examples of such students who were trained together with Dr. Cenk Sahinalp are Phuong Dao (research scientist first at the NIH, now Memorial Sloan Kettering), Fereydoun Hormozdiari (assistant professor at UC Davis) and Faraz Hach (research scientist at the VPC).

 

A World Class Centre

The Vancouver Prostate Centre (VPC) has a track record of success that has earned it a reputation as one of the world’s most respected cancer facilities. It is a National Centre of Excellence and a designated Centre of Excellence for Commercialization and Research.

Events

10th Anniversary Ride to Live

West Coast Motorcycle Ride To Live: May 26th

The 10th Anniversary West Coast Motorcycle Ride to Live is taking place in Vancouver and the Fraser Valley on May 26 (Victoria date to be finalized), with details on the event and how to register on the event website.  This fundraiser for Prostate Cancer Foundation BC includes a 50/50 raffle open to all BC residents over age 19.

Step  Up Challenge 2019

Step Up Challenge Vancouver - March 10, 2019

Donations are still being accepted for Prostate Cancer Canada's Step Up Challenge fundraiser, which took place on Sunday March 10.   Click here to donate to The Vancouver Prostate Centre team

Employment

Work at the Vancouver Prostate Centre

Monday, April 1, 2019

VPC's translational research profiled in UBC Faculty of Medicine News

Dr. Gleave at the VPC
Wednesday, April 10, 2019

Dr. Dong interviewed for Science in the City Publication of the Week

Dr. Xuesen Dong